#include "module.h"
#include "transition.h"
#include "container_classes.h"

Include dependency graph for iso.h:

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Data Structures
class	t_isoCTRL

class	extra_tr

class	t_iso_sp

Macros
#define	KILL_BELOW_PLASMA(E_) ( (rfield.lgPlasNu && ((E_)<rfield.plsfrq) ) ? 0.:1. )

#define	N_(A_) (iso_sp[ipISO][nelem].st[A_].n())

#define	L_(A_) (iso_sp[ipISO][nelem].st[A_].l())

#define	S_(A_) (iso_sp[ipISO][nelem].st[A_].S())

#define	J_(A_) (iso_sp[ipISO][nelem].st[A_].j())

#define	IPRAD 0

#define	IPCOLLIS 1

#define	RREC_MAXN 40

#define	LIKE_RREC_MAXN(A_) ( A_ == ipHELIUM ? 40 : 20 )

#define	N_ISO_TE_RECOMB 41

#define	SumUpToThisN 1000

#define	RECOMBMAGIC (130216)

Enumerations
enum	{ ipSINGLET = 1, ipDOUBLET = 2, ipTRIPLET = 3, ipMULTIPLET_END, ipMULTIPLET_BEGIN =ipSINGLET }

Functions
void	iso_cascade (long ipISO, long nelem)

void	iso_charge_transfer_update (long nelem)

void	iso_collapsed_Aul_update (long ipISO, long nelem)

void	iso_collapsed_lifetimes_update (long ipISO, long nelem)

void	iso_collide (long ipISO, long nelem)

void	iso_collisional_ionization (long ipISO, long nelem)

void	iso_continuum_lower (long ipISO, long nelem)

void	iso_cool (long ipISO, long nelem)

void	iso_setRedisFun (long ipISO, long nelem, long ipLo, long ipHi)

void	iso_setOpacity (long ipISO, long nelem, long ipLo, long ipHi)

void	iso_create (void)

double	iso_cross_section (double ERyd, double EthRyd, long n, long l, long S, long globalZ, long globalISO)

void	iso_departure_coefficients (long ipISO, long nelem)

double	iso_dielec_recomb_rate (long ipISO, long nelem, long ipLo)

void	iso_error_generation (long ipISO, long nelem)

long	iso_get_total_num_levels (long ipISO, long nmaxResolved, long numCollapsed)

void	IonHydro ()

void	iso_ionize_recombine (long ipISO, long nelem)

void	iso_level (const long ipISO, const long nelem, double &renorm, bool lgPrtMatrix)

void	iso_photo (long ipISO, long nelem)

void	iso_prt_pops (long ipISO, long nelem, bool lgPrtDeparCoef)

void	iso_put_error (long ipISO, long nelem, long ipHi, long ipLo, long whichData, realnum errorOpt, realnum errorPess)

void	iso_radiative_recomb (long ipISO, long nelem)

void	iso_radiative_recomb_effective (long ipISO, long nelem)

double	iso_recomb_check (long ipISO, long nelem, long level, double temperature)

void	iso_recomb_auxiliary_free (void)

void	iso_recomb_malloc (void)

void	iso_recomb_setup (long ipISO)

double	iso_RRCoef_Te (long ipISO, long nelem, double temp, long n)

void	iso_satellite_update (long nelem)

double	iso_state_lifetime (long ipISO, long nelem, long n, long l)

void	iso_solve (long ipISO, long nelem, double &maxerr)

void	iso_suprathermal (long ipISO, long nelem)

void	iso_update_num_levels (long ipISO, long nelem)

void	iso_update_rates (void)

void	iso_collapsed_update (void)

void	iso_set_ion_rates (long ipISO, long nelem)

void	iso_renorm (long nelem, long ipISO, double &renorm)

void	iso_multiplet_opacities (void)

string	iso_comment_tran_levels (long ipISO, long nelem, long ipLo, long ipHi)

Variables
long int	max_num_levels

const int	ipH1s = 0

const int	ipH2s = 1

const int	ipH2p = 2

const int	ipH3s = 3

const int	ipH3p = 4

const int	ipH3d = 5

const int	ipH4s = 6

const int	ipH4p = 7

const int	ipH4d = 8

const int	ipH4f = 9

const int	ipHe1s1S = 0

const int	ipHe2s3S = 1

const int	ipHe2s1S = 2

const int	ipHe2p3P0 = 3

const int	ipHe2p3P1 = 4

const int	ipHe2p3P2 = 5

const int	ipHe2p1P = 6

const int	ipHe3s3S = 7

const int	ipHe3s1S = 8

const int	ipHe3p3P = 9

const int	ipHe3d3D = 10

const int	ipHe3d1D = 11

const int	ipHe3p1P = 12

const int	ipH_LIKE = 0

const int	ipHE_LIKE = 1

const int	ipLI_LIKE = 2

const int	ipBE_LIKE = 3

const int	ipB_LIKE = 4

const int	ipC_LIKE = 5

const int	ipN_LIKE = 6

const int	ipO_LIKE = 7

const int	ipF_LIKE = 8

const int	ipNE_LIKE = 9

const int	ipNA_LIKE = 10

const int	ipMG_LIKE = 11

const int	ipAL_LIKE = 12

const int	ipSI_LIKE = 13

const int	ipP_LIKE = 14

const int	ipS_LIKE = 15

const int	ipCL_LIKE = 16

const int	ipAR_LIKE = 17

t_isoCTRL	iso_ctrl

t_iso_sp	iso_sp [NISO][LIMELM]

Detailed Description

information for isoelectronic sequences

Definition in file iso.h.

Macro Definition Documentation

#define IPCOLLIS 1

Definition at line 89 of file iso.h.

Referenced by iso_collide(), iso_collisional_ionization(), and iso_level().

#define IPRAD 0

Definition at line 88 of file iso.h.

Referenced by ForbiddenAuls(), helike_transprob(), hydro_transprob(), iso_cascade(), iso_ionize_recombine(), iso_level(), iso_put_recomb_error(), iso_radiative_recomb(), iso_radiative_recomb_effective(), and randomize_inten().

#define J_ ( A_ ) (iso_sp[ipISO][nelem].st[A_].j())

Definition at line 25 of file iso.h.

Referenced by DGER(), DGETF2(), DGETRF(), DTRSM(), helike_energy(), and helike_transprob().

#define KILL_BELOW_PLASMA ( E_ ) ( (rfield.lgPlasNu && ((E_)<rfield.plsfrq) ) ? 0.:1. )

This macro is used to zero any radiative process with photon energy below the plasma frequency. The energy must be in Rydbergs!

Definition at line 19 of file iso.h.

#define L_ ( A_ ) (iso_sp[ipISO][nelem].st[A_].l())

Definition at line 23 of file iso.h.

Referenced by Badnell_rec_init(), ForbiddenAuls(), helike_energy(), helike_transprob(), hydro_transprob(), iso_cascade(), iso_collapsed_Aul_update(), iso_put_recomb_error(), iso_radiative_recomb_effective(), iso_radrecomb_from_cross_section(), lines_helium(), Opacity_iso_photo_cs(), and SanityCheckBegin().

#define LIKE_RREC_MAXN ( A_ ) ( A_ == ipHELIUM ? 40 : 20 )

Ions of the sequences will go up to this n, h-like He will get same as iso roots.

Definition at line 100 of file iso.h.

Referenced by iso_recomb_malloc(), iso_recomb_setup(), and ParseCompile().

#define N_ ( A_ ) (iso_sp[ipISO][nelem].st[A_].n())

these macros are just an easy way to return the quantum numbers of a given level.

Definition at line 22 of file iso.h.

Referenced by collectSkipTrans(), ForbiddenAuls(), t_ADfA::h_coll_str(), helike_energy(), helike_transprob(), hydro_transprob(), iso_cascade(), iso_collide(), iso_collisional_ionization(), iso_create(), iso_level(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_radrecomb_from_cross_section(), lines_helium(), lines_hydro(), Opacity_iso_photo_cs(), RT_tau_init(), and SanityCheckBegin().

#define N_ISO_TE_RECOMB 41

Definition at line 102 of file iso.h.

Referenced by iso_recomb_malloc(), iso_recomb_setup(), and iso_RRCoef_Te().

#define RECOMBMAGIC (130216)

the magic number for the table of recombination coefficients, YYMMDD

Definition at line 108 of file iso.h.

Referenced by iso_recomb_setup().

#define RREC_MAXN 40

this is the number of levels used with the atom xx-like levels large command

Definition at line 97 of file iso.h.

Referenced by iso_recomb_malloc(), iso_recomb_setup(), ParseCompile(), and ParseDatabaseISO().

#define S_ ( A_ ) (iso_sp[ipISO][nelem].st[A_].S())

Definition at line 24 of file iso.h.

Referenced by Badnell_rec_init(), ForbiddenAuls(), helike_energy(), helike_transprob(), iso_cascade(), iso_put_recomb_error(), iso_radiative_recomb_effective(), iso_radrecomb_from_cross_section(), and Opacity_iso_photo_cs().

#define SumUpToThisN 1000

This is the n to go up to when calculating total recombination. Any change here will not be reflected in total recomb until "compile xxlike" is run

Definition at line 106 of file iso.h.

Referenced by iso_radiative_recomb(), and iso_recomb_setup().

Enumeration Type Documentation

anonymous enum

Enumerator
ipSINGLET
ipDOUBLET
ipTRIPLET
ipMULTIPLET_END
ipMULTIPLET_BEGIN

Definition at line 83 of file iso.h.

Function Documentation

void IonHydro ( )

IonHydro this controls hydrogen atomic and molecular crosstalk

Definition at line 187 of file iso_solve.cpp.

References atmdat, qList::Boltzmann(), t_atmdat::CharExcIonTotal, TransitionProxy::Coll(), colliders, CollisionProxy::ColUL(), t_secondaries::csupra, DEBUG_ENTRY, dense, t_dense::eden, t_dense::EdenHCorr, t_iso_sp::fb, findspecieslocal(), fixit, fnzone, fprintf(), t_hmi::H2_Solomon_dissoc_rate_BD96_H2g, t_hmi::H2_Solomon_dissoc_rate_TH85_H2g, t_hmi::H2_Solomon_dissoc_rate_used_H2g, t_hmi::H2_total, t_hydro::H_ion_frac_collis, t_hydro::H_ion_frac_photo, t_atmdat::HIonFrac, hmi, hydro, ion_solver(), ioQQQ, ipH1s, ipH2p, ipH_LIKE, ipHYDROGEN, iso_renorm(), iso_sp, t_hydro::lgHiPop2, t_dense::lgSetIoniz, t_trace::lgTrace, MAX2, t_hydro::pop2mx, PrintE82(), t_secondaries::sec2total, secondaries, t_dense::SetIoniz, SMALLDOUBLE, SMALLFLOAT, t_iso_sp::st, trace, t_iso_sp::trans(), and t_dense::xIonDense.

Referenced by ion_wrapper().

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void iso_cascade	(	long	ipISO,
		long	nelem
	)

iso_cascade - calculate cascade probabilities, branching ratios, and associated errors

Parameters

ipISO
nelem

Cascade probabilities are as defined in Robbins 68, generalized here for cascade probability for any iso sequence. >>refer He triplets Robbins, R.R. 1968, ApJ 151, 497R >>refer He triplets Robbins, R.R. 1968a, ApJ 151, 511R

Definition at line 1233 of file iso_create.cpp.

References ASSERT, EmissionProxy::Aul(), t_iso_sp::BranchRatio, t_iso_sp::CascadeProb, DEBUG_ENTRY, TransitionProxy::Emis(), t_iso_sp::ex, t_iso_sp::fb, fprintf(), ioQQQ, ipH_LIKE, ipHe2p3P0, ipHe2p3P1, ipHe2p3P2, ipHE_LIKE, ipHELIUM, IPRAD, iso_ctrl, iso_sp, L_, t_opac::lgCaseB, t_isoCTRL::lgRandErrGen, MALLOC, N_, t_iso_sp::n_HighestResolved_max, t_iso_sp::nCollapsed_max, t_iso_sp::numLevels_max, opac, pow2(), S, S_, t_isoCTRL::SmallA, and t_iso_sp::trans().

Referenced by iso_collapsed_update(), and iso_create().

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void iso_charge_transfer_update ( long nelem )

iso_charge_transfer_update - update rate coefficients for CT of H and He with everything else

Definition at line 18 of file iso_ionize_recombine.cpp.

References atmdat, t_atmdat::CharExcIonOf, t_atmdat::CharExcIonTotal, t_atmdat::CharExcRecTo, t_atmdat::CharExcRecTotal, DEBUG_ENTRY, dense, ipHYDROGEN, iso_sp, LIMELM, t_atmdat::NCX, t_iso_sp::st, and t_dense::xIonDense.

Referenced by ion_solver().

void iso_collapsed_Aul_update	(	long	ipISO,
		long	nelem
	)

iso_collapsed_Aul_update - update decays from collapsed levels

Parameters

ipISO
nelem

Definition at line 1649 of file iso_create.cpp.

References ASSERT, EmissionProxy::Aul(), t_iso_sp::CachedAs, DEBUG_ENTRY, TransitionProxy::Emis(), ipH_LIKE, ipHE_LIKE, iso_sp, L_, t_iso_sp::n_HighestResolved_max, t_iso_sp::nCollapsed_max, t_iso_sp::numLevels_max, t_iso_sp::QuantumNumbers2Index, t_iso_sp::st, TotalInsanity(), and t_iso_sp::trans().

Referenced by iso_collapsed_update(), and iso_zero().

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void iso_collapsed_lifetimes_update	(	long	ipISO,
		long	nelem
	)

iso_collapsed_lifetimes_update - update lifetimes of collapsed levels

Parameters

ipISO
nelem

Definition at line 1697 of file iso_create.cpp.

References ASSERT, EmissionProxy::Aul(), EmissionProxy::dampXvel(), DEBUG_ENTRY, TransitionProxy::Emis(), iso_ctrl, iso_sp, t_iso_sp::numLevels_max, t_isoCTRL::SmallA, SMALLFLOAT, t_iso_sp::st, and t_iso_sp::trans().

Referenced by iso_collapsed_update(), and iso_zero().

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void iso_collapsed_update ( void )

Definition at line 26 of file iso_solve.cpp.

References conv, dense, t_dense::IonHigh, t_dense::IonLow, ipH_LIKE, ipHELIUM, ipHYDROGEN, iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_lifetimes_update(), t_dense::lgElmtOn, MIN2, NISO, and t_conv::nTotalIoniz.

Referenced by ConvBase().

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void iso_collide	(	long	ipISO,
		long	nelem
	)

iso_collide - calculate collision data for ipISO, nelem

Parameters

ipISO
nelem

Definition at line 147 of file iso_collide.cpp.

References t_mesh::anu(), ASSERT, t_dense::AtomicWeight, BIGDOUBLE, qList::Boltzmann(), t_isoCTRL::chISO, CollisionProxy::col_str(), TransitionProxy::Coll(), colliders, t_ionbal::CollIonRate_Ground, CollisionProxy::ColUL(), qList::ConBoltz(), conv, DEBUG_ENTRY, dense, t_dense::density_low_limit, t_dense::EdenHCorr, t_iso_sp::fb, fp_equal(), fprintf(), Heavy, ionbal, ioQQQ, ipALPHA, IPCOLLIS, ipELECTRON, t_Heavy::ipHeavy, t_trace::ipIsoTrace, ipNCOLLIDER, iso_collisional_ionization(), iso_ctrl, iso_get_collision_strength(), iso_put_error(), iso_sp, iso_suprathermal(), t_opac::lgCaseB_HummerStorey, t_isoCTRL::lgColl_excite, t_trace::lgHBug, t_trace::lgHeBug, t_trace::lgIsoTraceFull, t_iso_sp::lgPopLTE_OK, t_trace::lgTrace, LIMELM, ColliderList::list, max(), MAX_DENSITY, MIN2, N_, NISO, t_isoCTRL::nLyaLevel, t_conv::nTotalIoniz, t_iso_sp::numLevels_local, t_iso_sp::numLevels_max, opac, phycon, powpq(), PrintEfmt, avx_ptr< T, lgBC >::ptr0(), CollisionProxy::rate_coef_ul(), CollisionProxy::rate_coef_ul_set(), rfield, SMALLDOUBLE, t_phycon::sqrte, t_iso_sp::st, t_isoCTRL::stat_ion, t_phycon::te, t_phycon::te32, t_phycon::te_ryd, trace, t_iso_sp::trans(), and vexp().

Referenced by iso_update_rates(), and SaveLineData().

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void iso_collisional_ionization	(	long	ipISO,
		long	nelem
	)

iso_collisional_ionization - calculate collisional ionization rate for ipISO, nelem

Parameters

ipISO
nelem

Definition at line 44 of file iso_collide.cpp.

References ASSERT, t_ADfA::coll_ion_wrapper(), DEBUG_ENTRY, t_iso_sp::fb, Hion_coll_ioniz_ratecoef(), hydro_vs_ioniz(), Singleton< t_ADfA >::Inst(), IPCOLLIS, iso_ctrl, iso_put_error(), iso_sp, t_isoCTRL::lgColl_ionize, t_iso_sp::lgLevelsLowered, t_isoCTRL::lgTopoff, N_, NISO, t_iso_sp::numLevels_max, phycon, and t_phycon::te.

Referenced by iso_collide().

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string iso_comment_tran_levels	(	long	ipISO,
		long	nelem,
		long	ipLo,
		long	ipHi
	)

Definition at line 117 of file prt_lines_hydro.cpp.

References db_comment_tran_levels(), GenerateTransitionConfiguration(), TransitionProxy::Hi(), ipH_LIKE, ipHE_LIKE, iso_sp, and t_iso_sp::trans().

Referenced by lines_helium(), and lines_hydro().

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void iso_continuum_lower	(	long	ipISO,
		long	nelem
	)

iso_continuum_lower - limit max prin. quan. no. due to continuum lowering processes

Parameters

ipISO
nelem

Definition at line 15 of file iso_continuum_lower.cpp.

References ASSERT, TransitionProxy::Coll(), CollisionZero(), conv, dense, t_dense::eden, fprintf(), INT16_MAX, ioQQQ, ipHELIUM, ipHYDROGEN, iso_ctrl, iso_get_total_num_levels(), iso_sp, t_trace::lgHBug, t_trace::lgHeBug, t_iso_sp::lgLevelsEverLowered, t_iso_sp::lgLevelsLowered, t_iso_sp::lgMustReeval, t_trace::lgTrace, LIMELM, MAX2, MAX_DENSITY, MIN2, MIN3, t_iso_sp::n_HighestResolved_local, t_iso_sp::n_HighestResolved_max, t_iso_sp::nCollapsed_local, t_iso_sp::nCollapsed_max, t_isoCTRL::nLyman, t_isoCTRL::nLyman_max, t_conv::nTotalIoniz, t_iso_sp::numLevels_local, t_iso_sp::numLevels_max, phycon, powpq(), t_phycon::te, trace, t_iso_sp::trans(), t_dense::xIonDense, and t_dense::xNucleiTotal.

Referenced by ContSetIntensity(), and iso_update_rates().

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void iso_cool	(	long	ipISO,
		long	nelem
	)

iso_cool compute net heating/cooling due to hydrogenc atom species

Parameters

ipISO	the isoelectronic sequence, 0 for H
nelem	is element, so 0 for H itself

Referenced by CoolEvaluate().

void iso_create ( void )

iso_create create storage space data for iso sequences, 1 one time per coreload

Todo:: 2 this should be changed for j-resolved levels

Definition at line 111 of file iso_create.cpp.

References TransitionProxy::AddLine2Stack(), ASSERT, EmissionProxy::Aul(), EmissionProxy::dampXvel(), DEBUG_ENTRY, dense, DoFSMixing(), TransitionProxy::Emis(), TransitionProxy::EnergyWN(), t_iso_sp::ex, ExtraLymanLines, t_iso_sp::fb, FillExtraLymanLine(), HeCollidSetup(), helike_energy(), helike_transprob(), HelikeTransProbSetup(), hydro_transprob(), Singleton< t_ADfA >::Inst(), TransitionProxy::ipEmis(), ipExtraLymanLines, ipH1s, ipH2p, ipH_LIKE, ipHe1s1S, ipHe2s3S, ipHE_LIKE, ipHELIUM, ipHYDROGEN, iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_ctrl, iso_recomb_auxiliary_free(), iso_recomb_malloc(), iso_recomb_setup(), iso_satellite(), iso_satellite_update(), iso_setOpacity(), iso_setRedisFun(), iso_sp, iso_zero(), t_dense::lgElmtOn, t_isoCTRL::lgFSM, lgHydroMalloc, LIMELM, N_, NISO, t_isoCTRL::nLyman_malloc, t_iso_sp::numLevels_max, t_ADfA::ph1(), POW2, RefIndex(), t_isoCTRL::SmallA, SMALLFLOAT, t_iso_sp::st, t_isoCTRL::stat_ion, TotalInsanity(), t_iso_sp::trans(), and TransitionProxy::WLAng().

Referenced by ContCreatePointers().

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double iso_cross_section	(	double	ERyd,
		double	EthRyd,
		long	n,
		long	l,
		long	S,
		long	globalZ,
		long	globalISO
	)

iso_cross_section get cross section for a particular level of an iso sequence ion

Parameters

ERyd
EthRyd
n
l
S
Z
ipISO

Definition at line 129 of file iso_radiative_recomb.cpp.

References cross_section(), DEBUG_ENTRY, H_cross_section(), He_cross_section(), ipH_LIKE, ipHE_LIKE, and TotalInsanity().

Referenced by iso_recomb_integrand().

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void iso_departure_coefficients	(	long	ipISO,
		long	nelem
	)

iso_departure_coefficients - calculate departure coefficients

Parameters

ipISO
nelem

Definition at line 401 of file iso_solve.cpp.

References DEBUG_ENTRY, dense, t_dense::eden, t_iso_sp::fb, iso_sp, t_iso_sp::numLevels_local, t_iso_sp::numLevels_max, safe_div(), SMALLFLOAT, t_iso_sp::st, and t_dense::xIonDense.

Referenced by ion_solver().

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double iso_dielec_recomb_rate	(	long	ipISO,
		long	nelem,
		long	ipLo
	)

iso_dielec_recomb_rate - get state-specific dielectronic recombination rate

Parameters

ipISO
nelem
ipLo

Definition at line 1152 of file iso_radiative_recomb.cpp.

References t_phycon::alogte, ASSERT, DEBUG_ENTRY, freeBound::DielecRecombVsTemp, exp10(), t_iso_sp::fb, hunt_bisect(), ipHe1s1S, ipHE_LIKE, iso_ctrl, iso_sp, t_isoCTRL::lgDielRecom, NUM_DR_TEMPS, and phycon.

Referenced by iso_radiative_recomb().

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void iso_error_generation	(	long	ipISO,
		long	nelem
	)

iso_error_generation generate gaussian errors

Parameters

ipISO
nelem

Definition at line 39 of file iso_error.cpp.

References ASSERT, DEBUG_ENTRY, t_iso_sp::ex, iso_sp, t_iso_sp::lgErrGenDone, MyGaussRand(), and t_iso_sp::numLevels_max.

Referenced by iso_update_rates().

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long iso_get_total_num_levels	(	long	ipISO,
		long	nmaxResolved,
		long	numCollapsed
	)

iso_get_total_num_levels - get total number of levels with the given number of resolved and collapsed

Parameters

ipISO
nmaxResolved
numCollapsed

Definition at line 1595 of file iso_create.cpp.

References DEBUG_ENTRY, ipH_LIKE, ipHE_LIKE, and TotalInsanity().

Referenced by iso_allocate(), iso_continuum_lower(), iso_recomb_malloc(), and iso_update_num_levels().

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void iso_ionize_recombine	(	long	ipISO,
		long	nelem
	)

iso_ionize_recombine evaluate state specific creation and destruction processes

Parameters

ipISO
nelem

Referenced by iso_update_rates().

void iso_level	(	const long	ipISO,
		const long	nelem,
		double &	renorm,
		bool	lgPrtMatrix
	)

iso_level solve for iso-sequence ionization balance

Parameters

ipISO	iso-sequence index
nelem	element index
renorm	renormalization parameter
lgPrtMatrix	boolean to print the matrix to be solved

Referenced by iso_solve().

void iso_multiplet_opacities ( void )

update multiplet opacities

Definition at line 756 of file iso_level.cpp.

References dense, t_dense::IonHigh, t_dense::IonLow, ipH_LIKE, ipHYDROGEN, iso_multiplet_opacities_one(), t_dense::lgElmtOn, LIMELM, and NISO.

Referenced by ConvBase().

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void iso_photo	(	long	ipISO,
		long	nelem
	)

iso_photo do photoionization rates for element nelem on the ipISO isoelectronic sequence

Parameters

ipISO
nelem

Referenced by iso_update_rates().

void iso_prt_pops	(	long	ipISO,
		long	nelem,
		bool	lgPrtDeparCoef
	)

iso_prt_pops routine to print level pops or departure coefficients for iso sequences

Parameters

ipISO
nelem
lgPrtDeparCoef

Definition at line 425 of file iso_solve.cpp.

References ASSERT, t_elementnames::chElementSym, t_isoCTRL::chISO, DEBUG_ENTRY, elementnames, fprintf(), ioQQQ, ipH_LIKE, ipHe2p3P0, ipHe2p3P1, ipHe2p3P2, ipHE_LIKE, iso_ctrl, iso_sp, ITEM_TO_PRINT, t_iso_sp::nCollapsed_local, NISO, t_iso_sp::numLevels_local, t_iso_sp::QuantumNumbers2Index, and t_iso_sp::st.

Referenced by PrtZone().

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void iso_put_error	(	long	ipISO,
		long	nelem,
		long	ipHi,
		long	ipLo,
		long	whichData,
		realnum	errorOpt,
		realnum	errorPess
	)

iso_put_error put an error bar on a piece of data, to be used with Gaussian random noise gen

Parameters

ipISO
nelem
ipHi
ipLo
whichData
errorOpt
errorPess

Referenced by ForbiddenAuls(), helike_transprob(), hydro_transprob(), iso_collide(), iso_collisional_ionization(), iso_put_recomb_error(), and iso_radiative_recomb().

void iso_radiative_recomb	(	long	ipISO,
		long	nelem
	)

iso_radiative_recomb - get rad recomb rate coefficients for iso sequences.

Parameters

ipISO
nelem

Definition at line 146 of file iso_radiative_recomb.cpp.

References ASSERT, cdEXIT, t_elementnames::chElementSym, t_isoCTRL::chISO, conv, cosmology, DEBUG_ENTRY, dense, t_ionbal::DR_Badnell_rate_coef, t_ionbal::DR_Badnell_suppress_fact, t_dense::eden, elementnames, EXIT_FAILURE, t_iso_sp::fb, fp_equal(), fprintf(), t_ADfA::H_rad_rec(), t_iso_sp::HighestLevelOpacStack, Singleton< t_ADfA >::Inst(), ionbal, ioQQQ, t_save::ioRecom, ipH1s, ipHE_LIKE, ipHELIUM, t_trace::ipIsoTrace, IPRAD, ipRecEsc, ipRecNetEsc, ipRecRad, iso_ctrl, iso_dielec_recomb_rate(), iso_put_error(), iso_put_recomb_error(), iso_radrecomb_from_cross_section(), iso_RRCoef_Te(), iso_sp, t_opac::lgCaseB, t_isoCTRL::lgDielRecom, t_cosmology::lgDo, t_trace::lgHBug, t_trace::lgHeBug, t_save::lgioRecom, t_trace::lgIsoTraceFull, t_iso_sp::lgLevelsLowered, t_iso_sp::lgMustReeval, t_isoCTRL::lgNoRecombInterp, t_isoCTRL::lgRandErrGen, t_isoCTRL::lgTopoff, t_trace::lgTrace, LIMELM, MAX2, MIN2, N_, t_iso_sp::n_HighestResolved_local, t_iso_sp::nCollapsed_local, t_iso_sp::nCollapsed_max, NHYDRO_MAX_LEVEL, NISO, t_conv::nTotalIoniz, t_iso_sp::numLevels_local, t_iso_sp::numLevels_max, opac, t_opac::OpacStack, phycon, PrintEfmt, t_iso_sp::RadRec_caseB, t_iso_sp::RadRec_effec, Recomb_Seaton59(), RT_recom_effic(), save, ShowMe(), SumUpToThisN, t_opac::TauAbsGeo, t_phycon::te, and trace.

Referenced by iso_update_rates().

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void iso_radiative_recomb_effective	(	long	ipISO,
		long	nelem
	)

iso_radiative_recomb_effective - get effective recomb rate coefficients into each level (including indirect)

Parameters

ipISO
nelem

Definition at line 616 of file iso_radiative_recomb.cpp.

References ASSERT, t_iso_sp::BranchRatio, t_iso_sp::CascadeProb, DEBUG_ENTRY, dprintf(), t_iso_sp::fb, fprintf(), ioQQQ, IPRAD, ipRecRad, iso_ctrl, iso_sp, L_, t_isoCTRL::lgRandErrGen, MAX2, N_, t_iso_sp::numLevels_local, phycon, pow2(), prt_wl(), S_, t_phycon::te, and wavelength.

Referenced by iso_update_rates().

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void iso_recomb_auxiliary_free ( void )

iso_recomb_auxiliary_free - free up some auxiliary space associated with iso recombination tables.

Definition at line 829 of file iso_radiative_recomb.cpp.

References DEBUG_ENTRY, NISO, and NumLevRecomb.

Referenced by iso_create().

double iso_recomb_check	(	long	ipISO,
		long	nelem,
		long	level,
		double	temperature
	)

iso_recomb_check - called by SanityCheck to confirm that recombination coef are ok, return value is relative error between new calculation of recom, and interp value

Parameters

ipISO
nelem	the chemical element, 1 for He
level	the level, 0 for ground
temperature	the temperature to be used

Definition at line 748 of file iso_radiative_recomb.cpp.

References DEBUG_ENTRY, iso_radrecomb_from_cross_section(), iso_RRCoef_Te(), and MAX2.

Referenced by SanityCheckBegin().

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void iso_recomb_malloc ( void )

iso_recomb_malloc - malloc space needed for iso recombination tables.

Definition at line 769 of file iso_radiative_recomb.cpp.

References DEBUG_ENTRY, dense, iso_get_total_num_levels(), iso_sp, t_dense::lgElmtOn, LIKE_RREC_MAXN, LIMELM, MALLOC, MAX2, N_ISO_TE_RECOMB, NISO, NumLevRecomb, RRCoef, RREC_MAXN, TeRRCoef, and TotalRecomb.

Referenced by iso_create().

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void iso_recomb_setup ( long ipISO )

iso_recomb_setup - read in or compile iso recombination tables.

Parameters

ipISO

Establish radiative recombination rate coefficients - RRC

Definition at line 842 of file iso_radiative_recomb.cpp.

References ASSERT, cdEXIT, t_elementnames::chElementSym, t_isoCTRL::chISO, chLine_LENGTH, DEBUG_ENTRY, dense, elementnames, EXIT_FAILURE, EXIT_SUCCESS, exp10(), FFmtRead(), fprintf(), t_ADfA::H_rad_rec(), Singleton< t_ADfA >::Inst(), ioQQQ, ipHe1s1S, iso_ctrl, iso_radrecomb_from_cross_section(), iso_sp, t_isoCTRL::lgCompileRecomb, t_dense::lgElmtOn, t_isoCTRL::lgNoRecombInterp, t_trace::lgTrace, LIKE_RREC_MAXN, LIMELM, N_ISO_TE_RECOMB, t_iso_sp::nCollapsed_max, NHYDRO_MAX_LEVEL, NISO, t_iso_sp::numLevels_max, NumLevRecomb, open_data(), read_whole_line(), Recomb_Seaton59(), RECOMBMAGIC, RRCoef, RREC_MAXN, SumUpToThisN, TeRRCoef, TotalRecomb, and trace.

Referenced by iso_create().

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void iso_renorm	(	long	nelem,
		long	ipISO,
		double &	renorm
	)

iso_renorm - renormalize H-like so that it agrees with the ionization balance

Definition at line 310 of file iso_solve.cpp.

References ASSERT, conv, DEBUG_ENTRY, dense, TransitionProxy::Emis(), fp_equal(), fprintf(), t_conv::IonizErrorAllowed, ioQQQ, iso_ctrl, iso_sp, t_conv::lgConvIoniz(), t_iso_sp::numLevels_local, EmissionProxy::PopOpc(), t_conv::setConvIonizFail(), t_isoCTRL::SmallA, SMALLFLOAT, t_iso_sp::st, t_iso_sp::trans(), and t_dense::xIonDense.

Referenced by clean_up(), ConvBase(), IonHydro(), iso_level(), lgTrivialSolution(), and ScaleIonDensities().

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double iso_RRCoef_Te	(	long	ipISO,
		long	nelem,
		double	temp,
		long	n
	)

iso_RRCoef_Te - interpolate iso recomb coeff as function of temperature

Parameters

ipISO
nelem
temp	- the electron temperature
n

Definition at line 722 of file iso_radiative_recomb.cpp.

References ASSERT, DEBUG_ENTRY, exp10(), iso_ctrl, iso_sp, t_isoCTRL::lgNoRecombInterp, N_ISO_TE_RECOMB, RRCoef, TempInterp(), TeRRCoef, and TotalRecomb.

Referenced by iso_radiative_recomb(), and iso_recomb_check().

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void iso_satellite_update ( long nelem )

iso_satellite_update - update iso satellite line information

Definition at line 1511 of file iso_create.cpp.

References abscf(), t_dense::AtomicWeight, DEBUG_ENTRY, dense, dsexp(), t_dense::eden, t_iso_sp::fb, GetGF(), ipHE_LIKE, ipSatelliteLines, iso_ctrl, iso_sp, t_isoCTRL::lgDielRecom, t_dense::lgElmtOn, max(), MIN2, NISO, t_iso_sp::numLevels_max, phycon, powpq(), SatelliteLines, t_isoCTRL::SmallA, SMALLDOUBLE, SMALLFLOAT, t_isoCTRL::stat_ion, t_phycon::te32, t_phycon::te_ryd, and t_dense::xIonDense.

Referenced by ion_solver(), iso_create(), and lines().

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void iso_set_ion_rates	(	long	ipISO,
		long	nelem
	)

Definition at line 811 of file iso_level.cpp.

References ASSERT, BIGDOUBLE, cdEXIT, DEBUG_ENTRY, EXIT_FAILURE, t_iso_sp::fb, fprintf(), t_he::frac_he0dest_23S, t_he::frac_he0dest_23S_photo, he, ionbal, ioQQQ, ipHe1s1S, ipHe2s3S, ipHE_LIKE, ipHELIUM, iso_sp, t_iso_sp::numLevels_local, nzone, t_he::nzone, t_ionbal::RateIoniz, t_ionbal::RateRecomIso, SMALLFLOAT, t_iso_sp::st, and t_iso_sp::xIonSimple.

Referenced by ion_solver().

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void iso_setOpacity	(	long	ipISO,
		long	nelem,
		long	ipLo,
		long	ipHi
	)

iso_setOpacity compute line opacity

Parameters

ipISO	isoelectronic sequence
nelem	element index
ipLo	index to lower state
ipHi	index to upper state

Definition at line 82 of file iso_create.cpp.

References abscf(), ASSERT, TransitionProxy::Emis(), TransitionProxy::EnergyWN(), GetGF(), EmissionProxy::gf(), iso_ctrl, iso_sp, EmissionProxy::opacity(), t_isoCTRL::SmallA, and t_iso_sp::trans().

Referenced by DoFSMixing(), and iso_create().

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void iso_setRedisFun	(	long	ipISO,
		long	nelem,
		long	ipLo,
		long	ipHi
	)

iso_setRedisFun assign the line redistribution function type

Parameters

ipISO	isoelectronic sequence
nelem	element index
ipLo	index to lower state
ipHi	index to upper state

Definition at line 48 of file iso_create.cpp.

References TransitionProxy::Emis(), ipH_LIKE, ipHYDROGEN, ipLY_A, t_isoCTRL::ipLyaRedist, t_isoCTRL::ipResoRedist, t_isoCTRL::ipSubRedist, EmissionProxy::iRedisFun(), iso_ctrl, iso_sp, t_isoCTRL::nLyaLevel, and t_iso_sp::trans().

Referenced by DoFSMixing(), and iso_create().

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void iso_solve	(	long	ipISO,
		long	nelem,
		double &	maxerr
	)

iso_solve - main routine to call iso_level and determine iso level balances

Parameters

ipISO

Definition at line 99 of file iso_solve.cpp.

References ASSERT, EmissionProxy::Aul(), DEBUG_ENTRY, dense, t_dense::eden, TransitionProxy::Emis(), t_iso_sp::fb, fprintf(), HydroLevel(), t_dense::IonHigh, t_dense::IonLow, ioQQQ, ipRecRad, iso_ctrl, iso_level(), iso_sp, t_dense::lgElmtOn, EmissionProxy::mult_opac(), t_iso_sp::nCollapsed_max, t_isoCTRL::nLyaLevel, t_iso_sp::numLevels_max, phycon, EmissionProxy::PopOpc(), pow2(), S, t_isoCTRL::SmallA, t_iso_sp::st, t_phycon::te, t_iso_sp::trans(), and t_dense::xIonDense.

Referenced by ConvBase(), and ion_solver().

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double iso_state_lifetime	(	long	ipISO,
		long	nelem,
		long	n,
		long	l
	)

Definition at line 1189 of file iso_create.cpp.

References ASSERT, t_dense::AtomicWeight, DEBUG_ENTRY, dense, ipHE_LIKE, M, POW2, pow2(), pow4(), and powi().

Referenced by FillExtraLymanLine(), and SanityCheckBegin().

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void iso_suprathermal	(	long	ipISO,
		long	nelem
	)

iso_suprathermal - calculate secondary excitation by suprathermal electrons for iso sequences

Parameters

ipISO
nelem

Definition at line 106 of file iso_collide.cpp.

References ASSERT, TransitionProxy::Coll(), DEBUG_ENTRY, TransitionProxy::Emis(), TransitionProxy::EnergyWN(), EmissionProxy::gf(), TransitionProxy::ipCont(), ipH2p, ipH_LIKE, ipHYDROGEN, iso_ctrl, iso_sp, t_isoCTRL::lgColl_excite, LIMELM, NISO, t_iso_sp::numLevels_max, CollisionProxy::rate_lu_nontherm_set(), secondaries, t_iso_sp::trans(), and t_secondaries::x12tot.

Referenced by iso_collide().

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void iso_update_num_levels	(	long	ipISO,
		long	nelem
	)

iso_update_num_levels - update level informations for iso sequences

Parameters

ipISO
nelem

Definition at line 1618 of file iso_create.cpp.

References ASSERT, cdEXIT, DEBUG_ENTRY, EXIT_FAILURE, fprintf(), ioQQQ, iso_get_total_num_levels(), iso_sp, MAX2, max_num_levels, t_iso_sp::n_HighestResolved_local, t_iso_sp::n_HighestResolved_max, t_iso_sp::nCollapsed_local, t_iso_sp::nCollapsed_max, t_iso_sp::numLevels_local, and t_iso_sp::numLevels_max.

Referenced by InitCoreload(), InitCoreloadPostparse(), InitSimPostparse(), ParseCompile(), and ParseDatabaseISO().

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void iso_update_rates ( void )

iso_update_rates routine to set up iso rates, level balance is done elsewhere

Todo:: 2 the indices for the two-photon rates must be changed for further iso sequences.

Definition at line 48 of file iso_solve.cpp.

References ASSERT, CalcTwoPhotonRates(), conv, dense, ionbal, t_dense::IonHigh, t_dense::IonLow, ipH_LIKE, ipHE_LIKE, ipHYDROGEN, iso_collide(), iso_continuum_lower(), iso_ctrl, iso_error_generation(), iso_ionize_recombine(), iso_photo(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_sp, t_isoCTRL::lgContinuumLoweringEnabled, t_dense::lgElmtOn, t_iso_sp::lgErrGenDone, t_isoCTRL::lgInd2nu_On, t_rfield::lgInducProcess, t_isoCTRL::lgRandErrGen, LIMELM, MIN2, NISO, t_conv::nPres2Ioniz, t_conv::nTotalIoniz, nzone, t_ionbal::RateRecomIso, t_ionbal::RateRecomTot, rfield, and t_iso_sp::TwoNu.

Referenced by ConvBase().

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Variable Documentation

const int ipAL_LIKE = 12

Definition at line 76 of file iso.h.

Referenced by read_UTA_lines().

const int ipAR_LIKE = 17

Definition at line 81 of file iso.h.

const int ipB_LIKE = 4

Definition at line 68 of file iso.h.

const int ipBE_LIKE = 3

Definition at line 67 of file iso.h.

const int ipC_LIKE = 5

Definition at line 69 of file iso.h.

const int ipCL_LIKE = 16

Definition at line 80 of file iso.h.

const int ipF_LIKE = 8

Definition at line 72 of file iso.h.

const int ipH1s = 0

some levels for hydrogenic species

Definition at line 29 of file iso.h.

Referenced by t_gaunt::brems_sum_ions(), cdTemp(), ChargTranSumHeat(), ContCreatePointers(), ContRate(), ContSetIntensity(), dBase_solve(), eden_sum(), GrainTemperature(), H21_cm_pops(), HydroLevel(), ion_photo(), IonHydro(), iso_assign_quantum_numbers(), iso_cool(), iso_create(), iso_ionize_recombine(), iso_level(), iso_photo(), iso_radiative_recomb(), IterRestart(), lines_hydro(), lines_iron_Ka(), mole_h_rate_diagnostics(), OpacityAddTotal(), OpacityCreateAll(), PresTotCurrent(), PrtAllTau(), PrtComment(), PrtFinal(), PrtHeader(), PrtHydroTrace1(), PrtHydroTrace1a(), PrtZone(), radius_increment(), RT_DestProb(), RT_diffuse(), RT_line_all_escape(), RT_OTS(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), save_opacity(), SaveDo(), SaveLineData(), SaveSpecial(), setXtraRatesCa2(), setXtraRatesFe2(), setXtraRatesO1(), and t_mesh::ValidateEdges().

const int ipH2p = 2

const int ipH2s = 1

Definition at line 30 of file iso.h.

Referenced by chkCaHeps(), ContCreatePointers(), ContRate(), ConvIterCheck(), GrainRateDr(), HydroLevel(), iso_cool(), lines_continuum(), lines_hydro(), OpacityAddTotal(), PrtAllTau(), PrtComment(), PrtHydroTrace1(), RT_stark(), RT_tau_init(), SaveDo(), SaveSpecial(), and t_mesh::ValidateEdges().

const int ipH3d = 5

Definition at line 34 of file iso.h.

Referenced by lines_continuum(), OpacityAddTotal(), and RT_tau_init().

const int ipH3p = 4

Definition at line 33 of file iso.h.

Referenced by ConvIterCheck(), lines_continuum(), lines_hydro(), OpacityAddTotal(), PrtAllTau(), PrtComment(), RT_tau_init(), and setXtraRatesO1().

const int ipH3s = 3

Definition at line 32 of file iso.h.

Referenced by lines_continuum(), lines_hydro(), OpacityAddTotal(), PrtAllTau(), and RT_tau_init().

const int ipH4d = 8

Definition at line 37 of file iso.h.

Referenced by OpacityAddTotal().

const int ipH4f = 9

Definition at line 38 of file iso.h.

Referenced by OpacityAddTotal().

const int ipH4p = 7

Definition at line 36 of file iso.h.

Referenced by lines_hydro(), OpacityAddTotal(), and PrtAllTau().

const int ipH4s = 6

Definition at line 35 of file iso.h.

Referenced by lines_hydro(), OpacityAddTotal(), and PrtAllTau().

const int ipH_LIKE = 0

these are array indices for isoelectronic sequences, same as element but used for array addressing to make context totally clear

Definition at line 64 of file iso.h.

Referenced by atmdat_2phot_shapefunction(), Badnell_rec_init(), t_gaunt::brems_sum_ions(), cdTemp(), ChargTranSumHeat(), chkCaHeps(), clean_up(), collectSkipTrans(), ContCreatePointers(), ContRate(), ContSetIntensity(), ConvBase(), ConvIterCheck(), CoolEvaluate(), CoolHyperfine(), CS_l_mixing(), CS_PercivalRichards78(), dBase_solve(), DynaCreateArrays(), DynaIonize(), DynaNewStep(), DynaSaveLast(), DynaStartZone(), eden_sum(), FillExtraLymanLine(), GetHlikeCollisionStrength(), GrainRateDr(), GrainTemperature(), H21_cm_pops(), t_ADfA::h_coll_str(), HeatSum(), HlikeCSInterp(), hydro_transprob(), hydro_transprob_collapsed_to_resolved(), HydroCSInterp(), HydroRecCool(), diatomics::init(), InitCoreload(), InitCoreloadPostparse(), InitDefaultsPreparse(), InitSimPostparse(), ion_photo(), ion_recomb(), ion_solver(), IonHelium(), IonHydro(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_update(), iso_comment_tran_levels(), iso_create(), iso_cross_section(), iso_get_collision_strength_collapsed_to_collapsed_fast(), iso_get_collision_strength_resolved(), iso_get_total_num_levels(), iso_ionize_recombine(), iso_level(), iso_multiplet_opacities(), iso_prt_pops(), iso_rad_rec_cooling_approx(), iso_rad_rec_cooling_extra(), iso_radrecomb_from_cross_section(), iso_setRedisFun(), iso_suprathermal(), iso_update_rates(), iso_zero(), IterRestart(), IterStart(), lgCheckMonitors(), lgTrivialSolution(), lines(), lines_continuum(), lines_general(), lines_helium(), lines_hydro(), lines_iron_Ka(), mole_h_rate_diagnostics(), my_Integrand_VF01_E< P >::my_Integrand_VF01_E(), Opacity_iso_photo_cs(), OpacityAddTotal(), OpacityCreateAll(), ParseCompile(), ParseDatabase(), ParseDatabaseISO(), ParseDont(), ParseElement(), ParseMonitorResults(), ParsePrint(), ParseTest(), ParseTrace(), PresTotCurrent(), PrtAllTau(), PrtComment(), PrtFinal(), PrtHeader(), PrtHydroTrace1(), prtmet(), PrtZone(), radius_first(), radius_increment(), radius_next(), RT_continuum(), RT_DestProb(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_all(), RT_line_all_escape(), RT_line_driving(), RT_line_pumping(), RT_OTS(), RT_OTS_Update(), RT_stark(), RT_tau_inc(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), save_opacity(), SaveDo(), SaveLineData(), SaveLineStuff(), SaveSpecial(), SecIoniz(), setXtraRatesCa2(), setXtraRatesFe2(), setXtraRatesO1(), state_get_put(), t_mesh::ValidateEdges(), t_dynamics::zero(), and t_isoCTRL::zero().

const int ipHe1s1S = 0

some levels for he-like species

Definition at line 43 of file iso.h.

Referenced by ContCreatePointers(), ForbiddenAuls(), HelikeTransProbSetup(), iso_create(), iso_dielec_recomb_rate(), iso_recomb_setup(), iso_set_ion_rates(), lines_helium(), lines_iron_Ka(), OpacityAddTotal(), PrtAllTau(), PrtZone(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), SaveDo(), SaveLineData(), and t_mesh::ValidateEdges().

const int ipHe2p1P = 6

Definition at line 51 of file iso.h.

Referenced by ForbiddenAuls(), lines_iron_Ka(), PrtAllTau(), PrtZone(), RT_tau_init(), RT_tau_reset(), SaveDo(), and t_isoCTRL::zero().

const int ipHe2p3P0 = 3

Definition at line 48 of file iso.h.

Referenced by AGN_He1_CS(), ForbiddenAuls(), HeCSTableInterp(), iso_cascade(), iso_prt_pops(), lines_helium(), lines_iron_Ka(), PrtZone(), and SaveDo().

const int ipHe2p3P1 = 4

Definition at line 49 of file iso.h.

Referenced by AGN_He1_CS(), ForbiddenAuls(), iso_cascade(), iso_prt_pops(), lines_helium(), lines_iron_Ka(), PrtZone(), and SaveDo().

const int ipHe2p3P2 = 5

Definition at line 50 of file iso.h.

Referenced by AGN_He1_CS(), ConvIterCheck(), ForbiddenAuls(), iso_cascade(), iso_prt_pops(), lines_helium(), lines_iron_Ka(), PrtAllTau(), PrtZone(), and SaveDo().

const int ipHe2s1S = 2

Definition at line 47 of file iso.h.

Referenced by ForbiddenAuls(), PrtAllTau(), and PrtZone().

const int ipHe2s3S = 1

Definition at line 46 of file iso.h.

Referenced by AGN_He1_CS(), cdColm(), ContCreatePointers(), ConvIterCheck(), ForbiddenAuls(), iso_create(), iso_set_ion_rates(), lines_helium(), PrtAllTau(), PrtZone(), and SaveDo().

const int ipHe3d1D = 11

Definition at line 58 of file iso.h.

Referenced by AGN_He1_CS(), and PrtZone().

const int ipHe3d3D = 10

Definition at line 57 of file iso.h.

Referenced by AGN_He1_CS(), lines_helium(), PrtAllTau(), and PrtZone().

const int ipHe3p1P = 12

Definition at line 59 of file iso.h.

Referenced by ForbiddenAuls(), PrtAllTau(), and PrtZone().

const int ipHe3p3P = 9

Definition at line 56 of file iso.h.

Referenced by AGN_He1_CS(), ForbiddenAuls(), lines_helium(), PrtAllTau(), and PrtZone().

const int ipHe3s1S = 8

Definition at line 55 of file iso.h.

Referenced by ForbiddenAuls(), and PrtZone().

const int ipHe3s3S = 7

Definition at line 54 of file iso.h.

Referenced by AGN_He1_CS(), ForbiddenAuls(), lines_helium(), and PrtZone().

const int ipHE_LIKE = 1

Definition at line 65 of file iso.h.

Referenced by atmdat_2phot_shapefunction(), Badnell_rec_init(), cdColm(), ContCreatePointers(), ContSetIntensity(), ConvIterCheck(), cross_section(), CS_l_mixing_PS64(), CS_l_mixing_PS64_expI(), CS_PercivalRichards78(), DoFSMixing(), DoSatelliteLines(), ForbiddenAuls(), GetHelikeCollisionStrength(), GetStandardHeLines(), he_1trans(), He_cross_section(), HeCollidSetup(), HeCSInterp(), HeCSTableInterp(), helike_energy(), helike_quantum_defect(), helike_transprob(), helike_transprob_collapsed_to_resolved(), InitCoreload(), IonHelium(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_comment_tran_levels(), iso_create(), iso_cross_section(), iso_dielec_recomb_rate(), iso_get_collision_strength_collapsed_to_collapsed_fast(), iso_get_collision_strength_collapsed_to_resolved(), iso_get_collision_strength_resolved(), iso_get_total_num_levels(), iso_level(), iso_prt_pops(), iso_put_recomb_error(), iso_radiative_recomb(), iso_radrecomb_from_cross_section(), iso_satellite(), iso_satellite_update(), iso_set_ion_rates(), iso_state_lifetime(), iso_update_rates(), iso_zero(), lgCheckMonitors(), lines(), lines_general(), lines_helium(), lines_iron_Ka(), mole_h_reactions(), my_Integrand_VF01_E< P >::my_Integrand_VF01_E(), Opacity_iso_photo_cs(), OpacityAddTotal(), OpacityCreateAll(), ParseCompile(), ParseDatabase(), ParseDatabaseISO(), ParseDont(), ParseElement(), ParseMonitorResults(), ParsePrint(), ParseTrace(), PresTotCurrent(), PrtAllTau(), PrtComment(), PrtFinal(), PrtZone(), RT_diffuse(), RT_line_all(), RT_line_driving(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), save_opacity(), SaveDo(), SaveLineData(), SecIoniz(), t_mesh::ValidateEdges(), and t_isoCTRL::zero().

const int ipLI_LIKE = 2

Definition at line 66 of file iso.h.

Referenced by read_UTA_lines().

const int ipMG_LIKE = 11

Definition at line 75 of file iso.h.

Referenced by read_UTA_lines().

const int ipN_LIKE = 6

Definition at line 70 of file iso.h.

const int ipNA_LIKE = 10

Definition at line 74 of file iso.h.

Referenced by read_UTA_lines().

const int ipNE_LIKE = 9

Definition at line 73 of file iso.h.

const int ipO_LIKE = 7

Definition at line 71 of file iso.h.

const int ipP_LIKE = 14

Definition at line 78 of file iso.h.

const int ipS_LIKE = 15

Definition at line 79 of file iso.h.

const int ipSI_LIKE = 13

Definition at line 77 of file iso.h.

t_isoCTRL iso_ctrl

Definition at line 9 of file iso.cpp.

Referenced by collectSkipTrans(), collision_strength_VF01(), ContCreatePointers(), ContSetIntensity(), ConvIterCheck(), CS_l_mixing(), CS_l_mixing_PS64(), CS_l_mixing_PS64_expI(), CS_l_mixing_S62(), CS_ThermAve_PR78(), CS_VS80(), CSIntegral_Romberg(), CSIntegral_Romberg_alpha(), DoSatelliteLines(), FillExtraLymanLine(), ForbiddenAuls(), GetHelikeCollisionStrength(), GetHlikeCollisionStrength(), he_1trans(), HeCSInterp(), InitCoreload(), InitCoreloadPostparse(), InitSimPostparse(), iso_allocate(), iso_cascade(), iso_collapsed_lifetimes_update(), iso_collide(), iso_collisional_ionization(), iso_continuum_lower(), iso_cool(), iso_create(), iso_dielec_recomb_rate(), iso_get_collision_strength(), iso_get_collision_strength_collapsed_to_collapsed_fast(), iso_get_collision_strength_collapsed_to_resolved(), iso_ionize_recombine(), iso_level(), iso_prt_pops(), iso_put_error(), iso_rad_rec_cooling_discrete(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_recomb_setup(), iso_renorm(), iso_RRCoef_Te(), iso_satellite(), iso_satellite_update(), iso_setOpacity(), iso_setRedisFun(), iso_solve(), iso_suprathermal(), iso_update_rates(), IterStart(), lines(), lines_helium(), lines_hydro(), my_Integrand_VF01_E< P >::my_Integrand_VF01_E(), ParseCompile(), ParseDatabase(), ParseDatabaseISO(), ParseSet(), PresTotCurrent(), PrtComment(), PrtLinePres(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_all(), RT_line_all_escape(), RT_line_driving(), RT_OTS_Update(), RT_stark(), RT_tau_inc(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), SaveLineData(), SaveLineStuff(), and state_get_put().

t_iso_sp iso_sp[NISO][LIMELM]

Definition at line 11 of file iso.cpp.

Referenced by Badnell_rec_init(), t_gaunt::brems_sum_ions(), cdColm(), cdTemp(), ChargTranSumHeat(), chkCaHeps(), collectSkipTrans(), ContCreatePointers(), ContRate(), ContSetIntensity(), ConvBase(), ConvIterCheck(), CoolEvaluate(), CoolHyperfine(), cross_section(), dBase_solve(), DoFSMixing(), DoSatelliteLines(), DynaCreateArrays(), DynaIonize(), DynaNewStep(), DynaSaveLast(), DynaStartZone(), eden_sum(), fill_array(), FillExtraLymanLine(), ForbiddenAuls(), GetHelikeCollisionStrength(), GetHlikeCollisionStrength(), GetStandardHeLines(), GrainRateDr(), GrainTemperature(), H21_cm_pops(), he_1trans(), He_cross_section(), HeatSum(), HeCollidSetup(), HeCSInterp(), HeCSTableInterp(), helike_energy(), helike_quantum_defect(), helike_transprob(), helike_transprob_collapsed_to_resolved(), HlikeCSInterp(), hydro_transprob(), hydro_transprob_collapsed_to_resolved(), HydroCSInterp(), HydroLevel(), HydroRecCool(), diatomics::init(), init_struc(), InitCoreload(), InitCoreloadPostparse(), InitSimPostparse(), ion_CX(), ion_photo(), ion_trim(), ion_trim2(), ion_widen(), IonHelium(), IonHydro(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_charge_transfer_update(), iso_collapsed_Aul_update(), iso_collapsed_lifetimes_update(), iso_collide(), iso_collisional_ionization(), iso_comment_tran_levels(), iso_continuum_lower(), iso_cool(), iso_create(), iso_departure_coefficients(), iso_dielec_recomb_rate(), iso_error_generation(), iso_get_collision_strength(), iso_get_collision_strength_collapsed_to_collapsed_fast(), iso_get_collision_strength_collapsed_to_resolved(), iso_ionize_recombine(), iso_level(), iso_multiplet_opacities_one(), iso_photo(), iso_prt_pops(), iso_put_error(), iso_put_recomb_error(), iso_rad_rec_cooling_approx(), iso_rad_rec_cooling_discrete(), iso_rad_rec_cooling_extra(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_radrecomb_from_cross_section(), iso_recomb_malloc(), iso_recomb_setup(), iso_renorm(), iso_RRCoef_Te(), iso_satellite(), iso_satellite_update(), iso_set_ion_rates(), iso_setOpacity(), iso_setRedisFun(), iso_solve(), iso_suprathermal(), iso_update_num_levels(), iso_update_rates(), iso_zero(), IterRestart(), IterStart(), lgCheckMonitors(), lines(), lines_continuum(), lines_general(), lines_helium(), lines_hydro(), lines_iron_Ka(), mole_h_rate_diagnostics(), mole_h_reactions(), Opacity_iso_photo_cs(), OpacityAdd1Element(), OpacityAddTotal(), OpacityCreateAll(), ParseCompile(), ParseDatabaseISO(), ParseElement(), ParsePrint(), PresTotCurrent(), PrintRates(), PrtAllTau(), PrtComment(), PrtFinal(), PrtHeader(), PrtHydroTrace1(), PrtHydroTrace1a(), PrtLinePres(), prtmet(), PrtZone(), radius_first(), radius_increment(), radius_next(), renorm_solution(), RT_continuum(), RT_DestProb(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_all(), RT_line_all_escape(), RT_line_driving(), RT_line_pumping(), RT_OTS(), RT_OTS_Update(), RT_stark(), RT_tau_inc(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), Save_Line_RT(), save_opacity(), SaveDo(), SaveLineData(), SaveLineStuff(), SaveSpecial(), SecIoniz(), setXtraRatesCa2(), setXtraRatesFe2(), setXtraRatesO1(), state_get_put(), and t_mesh::ValidateEdges().

long int max_num_levels

Definition at line 13 of file iso.cpp.

Referenced by InitCoreload(), and iso_update_num_levels().

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