#include <mesh.h>

Inheritance diagram for t_mesh:

Collaboration diagram for t_mesh:

Public Member Functions
void	InitMesh (bool lgUnitCell)

void	ValidateEdges () const

void	CheckMesh () const

bool	lgMeshSetUp () const

long	ncells () const

double	emm () const

double	egamry () const

double	getResolutionScaleFactor () const

void	setResolutionScaleFactor (double fac)

string	mesh_md5sum () const

const double *	anuptr () const

double	anu (size_t i) const

double	anu2 (size_t i) const

double	anu3 (size_t i) const

double	anuln (size_t i) const

const double *	anulog10ptr () const

double	anulog10 (size_t i) const

double	anusqrt (size_t i) const

double	anumin (size_t i) const

double	anumax (size_t i) const

double	widflx (size_t i) const

size_t	ipointC (double anu) const

size_t	ipointF (double anu) const

size_t	ithreshC (double threshold) const

size_t	ithreshF (double threshold) const

	t_mesh ()

Private Member Functions
void	p_ReadResolution ()

void	p_SetupMesh (bool lgUnitCell)

void	p_SetupEdges ()

Private Attributes
double	p_emm

double	p_egamry

double	p_ResolutionScaleFactor

string	p_mesh_md5sum

vector< double >	p_RangeUpperLimit

vector< double >	p_RangeResolution

vector< Energy >	p_edges

vector< double >	p_anu

vector< double >	p_anu_edge

vector< double >	p_widflx

vector< double >	p_anulog10

vector< double >	p_anuln

vector< double >	p_anusqrt

vector< double >	p_anu2

vector< double >	p_anu3

Detailed Description

Definition at line 10 of file mesh.h.

Constructor & Destructor Documentation

t_mesh::t_mesh ( )

inline

Definition at line 191 of file mesh.h.

References p_egamry, p_emm, and p_ResolutionScaleFactor.

Member Function Documentation

double t_mesh::anu ( size_t i ) const

inline

Definition at line 120 of file mesh.h.

References p_anu.

Referenced by AGN_Hemis(), CalcTwoPhotonRates(), ContCreateMesh(), ContCreatePointers(), ContNegative(), ContRate(), ContSetIntensity(), ConvInitSolution(), CoolEvaluate(), EdenChange(), eeBremsSpectrum(), extin(), ffun1(), flxCell(), GammaBn(), GammaK(), GammaPrt(), GetDissociationRateCoeff(), diatomics::GetHeatRate(), GrainDrift(), GrainIonColl(), GrainMakeDiffuse(), GrainMakeDiffuseSingle(), GrainRateDr(), GrainsInit(), IncidentContinuumHere(), InitBinAugerData(), InterpolateGridCoStar(), InterpolateRectGrid(), ion_collis(), ion_trim(), ion_trim_init(), ipShells(), iso_collide(), iso_rad_rec_cooling_discrete(), IterRestart(), lgCompileAtmosphere(), lgValidMesh(), lincom(), lindst1(), lines_continuum(), mie_calc_ial(), mie_read_opc(), mie_write_opc(), mole_h_reactions(), OpacityAddTotal(), diatomics::OpacityCreate(), OpacityCreate1Element(), OpacityCreateAll(), OpacityCreatePowerLaw(), OpacityCreateReilMan(), outline_base(), outsum(), PE_init(), pintr(), PlanckIntegral(), plankf(), pltcon(), pnegopc(), PresTotCurrent(), PrettyTransmission(), PrtComment(), PrtFinal(), PrtHeader(), punchFITS_GenericData(), qheat(), qheat_init(), qintr(), ReadTable(), RebinAtmosphere(), RebinSingleCell(), RT_continuum(), RT_DestProb(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_one_tauinc(), RT_OTS_ChkSum(), RT_OTS_PrtRate(), RT_recom_effic(), RT_tau_init(), SanityCheckBegin(), save_opacity(), SaveDo(), saveFITSfile(), SaveSpecial(), t_rfield::setTrimming(), sum_radiation(), sumcon(), tauff(), tfidle(), TwoPhotonSetup(), UpdatePot(), y0b(), and y0b01().

double t_mesh::anu2 ( size_t i ) const

inline

Definition at line 124 of file mesh.h.

References p_anu2.

Referenced by AGN_Hemis(), cdSPEC2(), ContCreatePointers(), ContSetIntensity(), eeBremsSpectrum(), flxCell(), GrainMakeDiffuse(), highen(), iso_rad_rec_cooling_discrete(), lines_continuum(), pltcon(), qheat(), RT_diffuse(), RT_iso_integrate_RRC(), SaveDo(), SaveSpecial(), and sumcon().

double t_mesh::anu3 ( size_t i ) const

inline

Definition at line 128 of file mesh.h.

References p_anu3.

Referenced by PlanckIntegral().

double t_mesh::anuln ( size_t i ) const

inline

Definition at line 132 of file mesh.h.

References p_anuln.

Referenced by eeBremsSpectrum().

double t_mesh::anulog10 ( size_t i ) const

inline

Definition at line 140 of file mesh.h.

References p_anulog10.

Referenced by pltcon(), and pltopc().

const double* t_mesh::anulog10ptr ( ) const

inline

Definition at line 136 of file mesh.h.

References get_ptr(), and p_anulog10.

Referenced by t_gaunt::brems_opac(), t_gaunt::p_setup_brems(), pltcon(), and pltopc().

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double t_mesh::anumax ( size_t i ) const

inline

Definition at line 152 of file mesh.h.

References p_anu_edge.

Referenced by CheckMesh(), ContBandsCreate(), ContSetIntensity(), EdenChange(), ffun1(), FindStrongestLineLabels(), GammaBn(), iso_rad_rec_cooling_discrete(), OpacityCreateAll(), PrtHeader(), punchFITS_EnergyData(), qheat_init(), RebinAtmosphere(), RebinSingleCell(), RT_iso_integrate_RRC(), TryDoubleStep(), and TwoPhotonSetup().

double t_mesh::anumin ( size_t i ) const

inline

Definition at line 148 of file mesh.h.

References p_anu_edge.

Referenced by CheckMesh(), ContBandsCreate(), ContSetIntensity(), EdenChange(), FindStrongestLineLabels(), GammaBn(), iso_rad_rec_cooling_discrete(), OpacityCreateAll(), PrtHeader(), punchFITS_EnergyData(), RebinAtmosphere(), RebinSingleCell(), RT_iso_integrate_RRC(), tfidle(), and TryDoubleStep().

const double* t_mesh::anuptr ( ) const

inline

Definition at line 116 of file mesh.h.

References get_ptr(), and p_anu.

Referenced by GammaK(), GrainCharge(), GrainTemperature(), lgReadAtmosphereTail(), mie_calc_ial(), mie_write_opc(), and UpdatePot1().

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double t_mesh::anusqrt ( size_t i ) const

inline

Definition at line 144 of file mesh.h.

References p_anusqrt.

Referenced by OpacityCreateAll().

void t_mesh::CheckMesh ( ) const

Definition at line 322 of file mesh.cpp.

References anumax(), anumin(), ASSERT, cdEXIT, DEBUG_ENTRY, egamry(), emm(), energy(), EXIT_FAILURE, fp_equal(), fprintf(), ioQQQ, ipointC(), ncells(), p_anu, and p_RangeUpperLimit.

Referenced by SanityCheckBegin().

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double t_mesh::egamry ( ) const

inline

Definition at line 97 of file mesh.h.

References p_egamry.

Referenced by t_PredCont::add(), CheckMesh(), dgaunt_check(), ffun1(), GrainsInit(), InitDefaultsPreparse(), InitGridBin(), ipoint(), lgCompileAtmosphere(), lgValidBinFile(), mie_read_opc(), mie_write_opc(), outline_base(), EnergyEntry::p_set_ip(), ParseAbsMag(), ParseBackgrd(), ParseBlackbody(), ParseCMB(), ParseEnergy(), ParseInterp(), ParseLuminosity(), ParsePlotRangeContin(), ParseRangeOption(), ParseRatio(), ParseSave(), ParseSet(), ParseStop(), ParseTable(), PrtHeader(), ReadTable(), and SaveDo().

double t_mesh::emm ( ) const

inline

Definition at line 93 of file mesh.h.

References p_emm.

Referenced by t_PredCont::add(), atmdat_LAMDA_readin(), CheckMesh(), ContCreatePointers(), dgaunt_check(), ffun1(), GrainsInit(), HyperfineCreate(), InitGridBin(), ipoint(), lgCompileAtmosphere(), lgValidBinFile(), mie_read_opc(), mie_write_opc(), outline_base(), EnergyEntry::p_set_ip(), ParseAbsMag(), ParseBackgrd(), ParseBlackbody(), ParseCMB(), ParseDatabaseISO(), ParseEnergy(), ParseInterp(), ParseLuminosity(), ParsePlotRangeContin(), ParseRangeOption(), ParseRatio(), ParseSave(), ParseSet(), ParseStop(), ParseTable(), qheat_init(), ReadTable(), resetBltin(), rfield_opac_malloc(), and SaveDo().

double t_mesh::getResolutionScaleFactor ( ) const

inline

Definition at line 101 of file mesh.h.

References p_ResolutionScaleFactor.

Referenced by conorm(), InitGridASCII(), lgCompileAtmosphere(), lgValidBinFile(), mie_write_opc(), and SaveDo().

void t_mesh::InitMesh ( bool lgUnitCell )

inline

Definition at line 63 of file mesh.h.

References lgMeshSetUp(), MD5datafile(), p_egamry, p_emm, p_mesh_md5sum, p_ReadResolution(), p_SetupEdges(), p_SetupMesh(), and Energy::Ryd().

Referenced by cdDrive().

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size_t t_mesh::ipointC ( double anu ) const

inline

Definition at line 161 of file mesh.h.

References ASSERT, hunt_bisect(), lgMeshSetUp(), and p_anu_edge.

Referenced by CheckMesh(), ffun1(), GrainCharge(), ipointF(), ParseTable(), pintr(), qheat_init(), qintr(), and saveFITSfile().

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size_t t_mesh::ipointF ( double anu ) const

inline

Definition at line 168 of file mesh.h.

References ipointC().

Referenced by ipoint().

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size_t t_mesh::ithreshC ( double threshold ) const

inline

Definition at line 174 of file mesh.h.

References ASSERT, hunt_bisect(), lgMeshSetUp(), and p_anu.

Referenced by eeBremsSpectrum(), GrainsInit(), ithreshF(), UpdatePot1(), and y0b().

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size_t t_mesh::ithreshF ( double threshold ) const

inline

Definition at line 185 of file mesh.h.

References ithreshC().

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bool t_mesh::lgMeshSetUp ( ) const

inline

Definition at line 84 of file mesh.h.

References p_anu.

Referenced by ContCreateMesh(), InitMesh(), ipointC(), ithreshC(), ParseCompile(), setResolutionScaleFactor(), and tfidle().

string t_mesh::mesh_md5sum ( ) const

inline

Definition at line 112 of file mesh.h.

References p_mesh_md5sum.

Referenced by InitGridBin(), lgCompileAtmosphere(), lgValidBinFile(), mie_read_opc(), mie_write_opc(), ReadTable(), and SaveDo().

long t_mesh::ncells ( ) const

inline

Definition at line 89 of file mesh.h.

References p_anu.

Referenced by cdDrive(), CheckMesh(), and ContCreateMesh().

void t_mesh::p_ReadResolution ( )

private

Definition at line 11 of file mesh.cpp.

References ASSERT, cdEXIT, DEBUG_ENTRY, EXIT_FAILURE, FFmtRead(), fp_equal(), fp_equal_tol(), fprintf(), INPUT_LINE_LENGTH, ioQQQ, t_trace::lgTrace, open_data(), p_edges, p_egamry, p_RangeResolution, p_RangeUpperLimit, p_ResolutionScaleFactor, read_whole_line(), and trace.

Referenced by InitMesh().

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void t_mesh::p_SetupEdges ( )

private

Definition at line 230 of file mesh.cpp.

References DEBUG_ENTRY, and p_edges.

Referenced by InitMesh().

void t_mesh::p_SetupMesh ( bool lgUnitCell )

private

Definition at line 145 of file mesh.cpp.

References ASSERT, DEBUG_ENTRY, fprintf(), ioQQQ, t_trace::lgTrace, p_anu, p_anu2, p_anu3, p_anu_edge, p_anuln, p_anulog10, p_anusqrt, p_emm, p_RangeResolution, p_RangeUpperLimit, p_ResolutionScaleFactor, p_widflx, pow2(), pow3(), and trace.

Referenced by InitMesh().

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void t_mesh::setResolutionScaleFactor ( double fac )

inline

Definition at line 105 of file mesh.h.

References ASSERT, fp_equal(), lgMeshSetUp(), and p_ResolutionScaleFactor.

Referenced by cdRead().

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void t_mesh::ValidateEdges ( ) const

Definition at line 274 of file mesh.cpp.

References cdEXIT, DEBUG_ENTRY, EXIT_FAILURE, fprintf(), ioQQQ, ipH1s, ipH2s, ipH_LIKE, ipHe1s1S, ipHE_LIKE, ipHELIUM, ipHYDROGEN, iso_sp, t_opac::o3exc, t_opac::o3exc3, opac, and p_edges.

Referenced by SanityCheckBegin().

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double t_mesh::widflx ( size_t i ) const

inline

Definition at line 156 of file mesh.h.

References p_widflx.

Referenced by AGN_Hemis(), cdSPEC2(), ContBandsCreate(), ContCreatePointers(), ContRate(), ContSetIntensity(), eeBremsSpectrum(), flxCell(), GammaBn(), GrainMakeDiffuse(), GrainRateDr(), IncidentContinuumHere(), iso_rad_rec_cooling_discrete(), lincom(), lines_continuum(), t_gaunt::p_setup_brems(), pintr(), PlanckIntegral(), pltcon(), PrettyTransmission(), PrtFinal(), PrtHeader(), PrtTwoPhotonEmissCoef(), punchFITS_SpectraData(), qheat(), qheat_init(), qintr(), RT_diffuse(), RT_iso_integrate_RRC(), SaveDo(), SaveSpecial(), t_rfield::setTrimming(), tauff(), tfidle(), and TwoPhotonSetup().

Field Documentation

vector<double> t_mesh::p_anu

private

energy in Ryd of center of cell

Definition at line 38 of file mesh.h.

Referenced by anu(), anuptr(), CheckMesh(), ithreshC(), lgMeshSetUp(), ncells(), and p_SetupMesh().

vector<double> t_mesh::p_anu2

private

Definition at line 50 of file mesh.h.

Referenced by anu2(), and p_SetupMesh().

vector<double> t_mesh::p_anu3

private

Definition at line 51 of file mesh.h.

Referenced by anu3(), and p_SetupMesh().

vector<double> t_mesh::p_anu_edge

private

energy in Ryd at the edges of each cell

Definition at line 41 of file mesh.h.

Referenced by anumax(), anumin(), ipointC(), and p_SetupMesh().

vector<double> t_mesh::p_anuln

private

Definition at line 48 of file mesh.h.

Referenced by anuln(), and p_SetupMesh().

vector<double> t_mesh::p_anulog10

private

these are log, sqrt, square, and cube of anu array

Definition at line 47 of file mesh.h.

Referenced by anulog10(), anulog10ptr(), and p_SetupMesh().

vector<double> t_mesh::p_anusqrt

private

Definition at line 49 of file mesh.h.

Referenced by anusqrt(), and p_SetupMesh().

vector<Energy> t_mesh::p_edges

private

a list of major ionization edges that need to be fiddled into the frequency mesh

Definition at line 35 of file mesh.h.

Referenced by p_ReadResolution(), p_SetupEdges(), and ValidateEdges().

double t_mesh::p_egamry

private

the energy of the upper limit high-energy limit of the continuum

Definition at line 19 of file mesh.h.

Referenced by egamry(), InitMesh(), p_ReadResolution(), and t_mesh().

double t_mesh::p_emm

private

================================================================================= the following define the continuum energy scale and its limits the energy of the lower limit low-energy limit of the continuum

Definition at line 16 of file mesh.h.

Referenced by emm(), InitMesh(), p_SetupMesh(), and t_mesh().

string t_mesh::p_mesh_md5sum

private

MD5 sum of the continuum_mesh.ini file

Definition at line 26 of file mesh.h.

Referenced by InitMesh(), and mesh_md5sum().

vector<double> t_mesh::p_RangeResolution

private

Definition at line 32 of file mesh.h.

Referenced by p_ReadResolution(), and p_SetupMesh().

vector<double> t_mesh::p_RangeUpperLimit