species2.cpp File Reference

#include "cddefines.h"
#include "atmdat.h"
#include "phycon.h"
#include "taulines.h"
#include "atoms.h"
#include "rfield.h"
#include "conv.h"
#include "secondaries.h"
#include "thermal.h"
#include "cooling.h"
#include "ionbal.h"
#include "iso.h"
#include "mole.h"
#include "dense.h"
#include "lines_service.h"
#include "trace.h"
#include "doppvel.h"
#include "oxy.h"
#include "hydrogenic.h"
#include "vectorize.h"

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Functions
STATIC double	LeidenCollRate (long, long, const TransitionProxy &, double)
STATIC double	StoutCollRate (long ipSpecies, long ipCollider, const TransitionProxy &, double ftemp)
STATIC double	ChiantiCollRate (long ipSpecies, long ipCollider, const TransitionProxy &, double ftemp)
STATIC void	setXtraRatesO1 (const TransitionProxy &tr, double &xtraExRate, double &xtraDxRate)
STATIC void	setXtraRatesCa2 (const TransitionProxy &tr, double &xtraDxRate)
STATIC void	setXtraRatesFe2 (const TransitionProxy &tr, double &xtraExRate, double &xtraDxRate)
static realnum	dBaseAbund (long ipSpecies)
void	dBaseTrim (void)
void	dBaseUpdateCollCoeffs (void)
void	dBase_solve (void)
double	CHIANTI_Upsilon (long ipSpecies, long ipCollider, long ipHi, long ipLo, double ftemp)

Variables
static const bool	DEBUGSTATE = false

Function Documentation

double CHIANTI_Upsilon	(	long	,
		long	,
		long	,
		long	,
		double
	)

CHIANTI_Upsilon converts Chianti collision splines to collision strengths

Definition at line 884 of file species2.cpp.

References ASSERT, AtmolCollSplines, dBaseSpecies, DEBUG_ENTRY, DEBUGSTATE, exp10(), fprintf(), ioQQQ, linint(), splint(), and TotalInsanity().

Referenced by ChiantiCollRate(), and SaveDo().

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STATIC double ChiantiCollRate	(	long	ipSpecies,
		long	ipCollider,
		const TransitionProxy &	tr,
		double	ftemp
	)

Definition at line 858 of file species2.cpp.

References CHIANTI_Upsilon(), DEBUG_ENTRY, TransitionProxy::Hi(), ipELECTRON, TransitionProxy::ipHi(), TransitionProxy::ipLo(), and ipPROTON.

Referenced by dBaseUpdateCollCoeffs().

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void dBase_solve

(

void

)

Definition at line 271 of file species2.cpp.

References abund, atmdat, atoms, cdEXIT, colliders, CollisionZero(), conv, CoolAdd(), t_oxy::d5007r, t_atoms::d5200r, t_oxy::d6300, dBaseAbund(), dBaseSpecies, dBaseStates, dBaseTrans, t_thermal::dCooldT, DEBUG_ENTRY, depart(), t_hydro::dstfe2lya, DumpLine(), t_thermal::elementcool, TransitionProxy::Emis(), EmLineZero(), energy(), TransitionProxy::EnergyWN(), t_ionbal::ExcitationGround, EXIT_FAILURE, fp_equal(), fprintf(), EmissionProxy::gf(), hydro, ionbal, ioQQQ, ipELECTRON, ipH1s, ipH2p, ipH_LIKE, ipHYDROGEN, ipIRON, t_atmdat::ipSpecIon, iso_sp, LEVEL_ACTIVE, LEVEL_INACTIVE, t_conv::lgSearch, LIMELM, MALLOC, max(), MAX2, MIN2, nSpecies, nzone, oxy, phycon, avx_ptr< T, lgBC >::ptr0(), t_atoms::rateMg2, secondaries, set_xIntensity(), t_thermal::setHeating(), setXtraRatesCa2(), setXtraRatesFe2(), setXtraRatesO1(), SMALLFLOAT, t_phycon::sqrte, t_iso_sp::st, t_phycon::te, thermal, TotalInsanity(), t_iso_sp::trans(), vexp(), and t_secondaries::x12tot.

Referenced by CoolEvaluate().

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static realnum dBaseAbund ( long  ipSpecies )

static

Todo:

0 this pointer should be cached one time, and the species removed from the list if it is not computed

Definition at line 33 of file species2.cpp.

References abund, ASSERT, conv, dBaseSpecies, dBaseStates, molezone::den, dense, exists(), findspecieslocal(), fprintf(), ioQQQ, LIMELM, t_conv::nTotalIoniz, and t_dense::xIonDense.

Referenced by dBase_solve(), and dBaseTrim().

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void dBaseTrim

(

void

)

Definition at line 61 of file species2.cpp.

References abund, conv, dBaseAbund(), dBaseSpecies, dBaseStates, dBaseTrans, DEBUG_ENTRY, dense, nSpecies, t_conv::nTotalIoniz, and t_dense::xNucleiTotal.

Referenced by CoolEvaluate().

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void dBaseUpdateCollCoeffs

(

void

)

Definition at line 102 of file species2.cpp.

References atmdat, AtmolCollRateCoeff, ChiantiCollRate(), CollisionProxy::col_str(), t_atmdat::collstrDefault, genericState::database(), dBaseSpecies, dBaseTrans, DEBUG_ENTRY, ipATOM_H, ipATOM_HE, ipELECTRON, ipH2, ipH2_ORTHO, ipH2_PARA, ipHE_PLUS, ipNCOLLIDER, ipPROTON, LeidenCollRate(), t_atmdat::lgGbarOn, MakeCS(), nSpecies, phycon, CollisionProxy::rate_coef_ul(), CollisionProxy::rate_coef_ul_set(), t_phycon::sqrte, StoutCollRate(), t_phycon::te, and TotalInsanity().

Referenced by CoolEvaluate().

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STATIC double LeidenCollRate	(	long	ipSpecies,
		long	ipCollider,
		const TransitionProxy &	tr,
		double	ftemp
	)

Definition at line 786 of file species2.cpp.

References AtmolCollRateCoeff, DEBUG_ENTRY, InterpCollRate(), TransitionProxy::ipHi(), and TransitionProxy::ipLo().

Referenced by dBaseUpdateCollCoeffs().

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STATIC void setXtraRatesCa2	(	const TransitionProxy &	tr,
		double &	xtraDxRate
	)

Definition at line 1074 of file species2.cpp.

References DEBUG_ENTRY, TransitionProxy::ipCont(), ipH1s, ipH2p, ipH_LIKE, TransitionProxy::ipHi(), ipHYDROGEN, iso_sp, t_rfield::otslin, rfield, and t_iso_sp::trans().

Referenced by dBase_solve().

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STATIC void setXtraRatesFe2	(	const TransitionProxy &	tr,
		double &	xtraExRate,
		double &	xtraDxRate
	)

Definition at line 1114 of file species2.cpp.

References t_dense::AtomicWeight, EmissionProxy::Aul(), DEBUG_ENTRY, dense, TransitionProxy::Emis(), TransitionProxy::EnergyWN(), GetDopplerWidth(), TransitionProxy::Hi(), t_hydro::HLineWidth, hydro, ipH1s, ipH2p, ipH_LIKE, ipHYDROGEN, ipIRON, iso_sp, iteration, t_hydro::lgLyaFeIIPumpOn, TransitionProxy::Lo(), MAX2, powi(), SMALLFLOAT, t_iso_sp::st, EmissionProxy::TauIn(), and EmissionProxy::TauTot().

Referenced by dBase_solve().

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STATIC void setXtraRatesO1	(	const TransitionProxy &	tr,
		double &	xtraExRate,
		double &	xtraDxRate
	)

Definition at line 996 of file species2.cpp.

References t_dense::AtomicWeight, EmissionProxy::Aul(), DEBUG_ENTRY, dense, TransitionProxy::Emis(), fixit, fprintf(), GetDopplerWidth(), ioQQQ, ipH1s, ipH3p, ipH_LIKE, ipHYDROGEN, ipOXYGEN, iso_sp, t_rfield::lgInducProcess, t_trace::lgTr8446, t_trace::lgTrace, MAX2, MIN2, EmissionProxy::Pesc_total(), rfield, t_iso_sp::st, trace, t_iso_sp::trans(), and t_dense::xIonDense.

Referenced by dBase_solve().

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STATIC double StoutCollRate	(	long	ipSpecies,
		long	ipCollider,
		const TransitionProxy &	tr,
		double	ftemp
	)

Definition at line 794 of file species2.cpp.

References ASSERT, cdEXIT, CollisionProxy::col_str(), TransitionProxy::Coll(), DEBUG_ENTRY, EXIT_FAILURE, fprintf(), TransitionProxy::Hi(), ioQQQ, ipELECTRON, TransitionProxy::ipHi(), TransitionProxy::ipLo(), linint(), and StoutCollData.

Referenced by dBaseUpdateCollCoeffs().

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Variable Documentation

const bool DEBUGSTATE = false

static

Definition at line 31 of file species2.cpp.

Referenced by CHIANTI_Upsilon().